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16S rRNA Gene Sequencing from Bacterial DNA (for Microbiome Analysis)

Published: August 9, 2026Updated: August 16, 2026

This test analyzes genetic material from bacteria in your sample to identify specific bacterial species present. It helps assess microbial communities, often used in research or specialized clinical settings.

Quick summary

["This test identifies bacteria in your sample by examining their unique genetic material."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
76575-0
Short code
16SrRNA
Synonyms
Bact 16S rRNA Spec Ql NAA+probe
Category
chemistry
Sample
serum
Container
Sterile, DNA-free, leak-proof container (e.g., cryovial or sterile tube without preservatives)
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
≥ 0 years
Method
probe-amp-tar
CPT
87801
SNOMED
122450005
Specimen volume
1-2 mL of serum or appropriate specimen volume per laboratory protocol
Stability
Room temperature: 2 hours; Refrigerated (2-8°C): 24 hours; Frozen (-70°C or below): 30 days for nucleic acid preservation
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
24–72 hours
Order
routine

What This Test Measures

The test focuses on the 16S rRNA gene, a conserved region in bacterial DNA that varies slightly among different species. By sequencing this gene, healthcare providers can determine which bacteria are present in your sample, even if they are not cultured or visible under a microscope.

How the Sample Is Collected

Your sample (likely a stool, saliva, or other bodily fluid) is sent to a lab where bacteria are extracted from it. The lab then isolates the 16S rRNA gene and sequences it to create a profile of the bacterial species present.

When This Test Might Be Ordered

This test is typically used in advanced diagnostic or research settings, such as microbiome studies, infectious disease investigations, or when traditional culture methods are insufficient to identify bacteria.

What to Expect Before the Test

No special preparation is usually required, but you may need to follow instructions specific to your sample type (e.g., fasting for stool samples). Avoid certain medications or dietary restrictions if directed by your healthcare provider.

Reference range

Negative (No bacterial 16S rRNA detected)N/A

Specimen: serum

No special patient preparation required. Specimen should be collected prior to initiation of antimicrobial therapy when possible to maximize diagnostic yield.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

◆Associated findings1

Short name

Bacterial 16S rRNA Sequencing

Frequently asked questions

This test provides detailed insights into your microbial environment, which can be critical for diagnosing infections, evaluating gut health, or guiding treatments for conditions like inflammatory bowel disease or antibiotic-associated diarrhea.
This test helps identify bacterial species that may be contributing to or associated with your health condition, even if they are not causing obvious symptoms.
How long will it take to get results?
Results can take several days to weeks, depending on lab processing times and sequencing complexity. Your healthcare provider will discuss the results with you once they are ready.
Is this test covered by insurance?
Coverage depends on your insurance plan and clinical indication. Check with your provider or insurance company to confirm if this specialized test is covered for your specific situation.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy