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Understanding Your Laboratory Test: What to Expect

Published: August 9, 2026Updated: August 17, 2026

A stool bacteria culture test identifies harmful bacteria in your digestive tract to help diagnose infections.

Quick summary

{"This test detects disease-causing bacteria in your stool sample","It helps doctors diagnose bacterial gastrointestinal infections","Results guide appropriate antibiotic treatment","Sample collection is simple and non-invasive","Results typically available within 2-5 days"}

Medically reviewed by WellAlly Editorial TeamLast reviewed August 17, 2026Editorial policy

Key facts at a glance

LOINC
625-4
Short code
STOBCX
Synonyms
Bacteria Stl Cult
Category
chemistry
Sample
stool
Container
Sterile, leak-proof, wide-mouth container with screw-cap lid; or stool culture transport swab system (e.g., Cary-Blair medium). Avoid rectal swab if possible.
Units
N/A
Ref low
10
Ref high
40
Critical range
— – 500 N/A
Fasting
false
Population
adult
Sex
all
Age range
≥ 0 years
Method
culture
CPT
87045
SNOMED
40769000
Specimen volume
5-10 grams of fresh stool (approximately walnut-sized) or 1-2 mL of liquid stool; rectal swab acceptable when stool specimen unavailable.
Stability
Unpreserved stool: process within 2 hours of collection at room temperature; refrigerated (2-8°C): process within 24 hours; in Cary-Blair transport medium: stable up to 48-72 hours at room temperature or refrigerated. Frozen specimens are unacceptable for culture.
TAT
48–96 hours
Order
routine

This test is a laboratory analysis that measures substances in a sample of your blood, urine, or other body fluid to help your doctor evaluate how well your body is functioning.

A stool bacteria culture test, also called a stool culture or bacterial culture of stool, is a laboratory test that identifies harmful bacteria in your feces. The test works by placing a small stool sample on special growth materials (culture media) that allow bacteria to multiply. Lab technicians then examine the grown bacteria under a microscope and perform additional tests to identify exactly what type of bacteria is present.

Your doctor may order this test to help diagnose a medical condition, monitor an ongoing illness, check how well a treatment is working, or screen for possible health problems before symptoms appear.

Your doctor may order this test if you have symptoms of a bacterial gastrointestinal infection, such as diarrhea (especially if bloody), abdominal pain, cramping, nausea, vomiting, or fever. Common bacterial infections this test can detect include Salmonella, Shigella, Campylobacter, Escherichia coli O157:H7 (E. coli), and Yersinia. The test helps confirm whether your symptoms are caused by a bacterial infection and identifies the specific bacteria so the right treatment can be prescribed.

In general, you may be asked to avoid eating or drinking for a certain number of hours before your appointment, and you should tell your care team about all medicines, vitamins, and supplements you take.

Before the test, inform your doctor about any recent antibiotic use, antidiarrheal medications, or contrast dyes (like those used for CT scans or barium X-rays), as these may affect test results. You do not need to fast before providing a stool sample. It is important to collect the sample in a clean, dry, wide-mouthed container provided by your healthcare facility or laboratory. Avoid contaminating the sample with urine, toilet water, or toilet paper.

A trained health professional will collect the sample, usually by drawing a small amount of blood from a vein in your arm with a sterile needle, and the specimen is then sent to a laboratory for analysis.

Collect a small amount of stool (about 1-2 tablespoons or the size of a walnut) from a bowel movement. Ideally, collect the sample from a part of the stool that appears bloody, mucousy, or watery, as these areas are more likely to contain pathogens. Place the sample in the sterile container provided, close it tightly, and label it with your name and the date. Deliver the sample to the laboratory as soon as possible, preferably within 2 hours of collection. If you cannot deliver the sample immediately, store it in a refrigerator (not frozen) but do not keep it longer than 24 hours.

Your results are compared with standard reference ranges, and your doctor will explain whether your values fall within the normal range and what any abnormal findings may mean for your health and treatment plan.

Results are typically reported as either 'No pathogens isolated' (normal) or by naming the specific bacteria found. A positive result means a disease-causing bacterium was identified and is likely causing your symptoms. Your doctor will interpret the results in context with your symptoms, medical history, and other test results. If bacteria are found, the laboratory may also perform antibiotic susceptibility testing to determine which antibiotics will be most effective in treating the infection.

Reference range

Adult: 10-40 U/LN/A

Specimen: stool

No special dietary restrictions required. Patients should not be taking antibiotics or antidiarrheal medications, if possible, prior to specimen collection as these may decrease pathogen recovery. Specimen should be collected in the early acute phase of illness when pathogens are most likely to be present. Avoid contamination with urine, toilet water, or toilet paper.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

The stool bacteria culture test is primarily used to diagnose acute bacterial gastroenteritis and foodborne illnesses. It is particularly important for patients with severe, prolonged, or bloody diarrhea, as these symptoms may indicate a more serious infection requiring specific treatment. The test helps differentiate between bacterial infections (which may require antibiotics) and viral infections (which do not respond to antibiotics). Positive results also help public health authorities track and monitor outbreaks of foodborne illnesses. Additionally, the test may be used to monitor treatment effectiveness and to clear patients from isolation in hospital settings, particularly for infections like Shigella or Salmonella.

Frequently asked questions

Does a normal result mean I have no infection?
Not necessarily. A 'normal' or negative result means no common disease-causing bacteria were found in the culture. However, you may still have an infection caused by viruses, parasites, or less common bacteria that this test does not detect. Your doctor will consider your symptoms and may order additional tests if the infection is suspected but not confirmed by this test.
How long does it take to get results?
Results typically take 2-5 days. Some bacteria grow quickly and can be identified within 2 days, while others require more time to grow and identify. If the laboratory needs to perform additional testing, such as antibiotic sensitivity testing, it may take longer.
Do I need antibiotics if bacteria are found?
Not always. Some bacterial infections, like many cases of Salmonella, resolve on their own without antibiotic treatment. In fact, antibiotics may sometimes prolong carriage of certain bacteria. Your doctor will determine whether antibiotics are necessary based on the type of bacteria identified, the severity of your symptoms, your age, and your overall health. For severe infections or high-risk patients (such as young children, elderly individuals, or those with weakened immune systems), antibiotics are typically recommended.
Can I collect my stool sample at home?
Yes, you can collect the sample at home. Use the sterile container provided by your healthcare provider or laboratory. Follow the collection instructions carefully, and deliver the sample to the lab as soon as possible. If you are collecting at a healthcare facility, staff will provide instructions and may collect the sample onsite.
Are there any risks or side effects from this test?
There are no direct risks or side effects from the stool culture test itself, as it only requires a stool sample and does not involve needles, radiation, or invasive procedures. The main consideration is ensuring proper sample collection and timely delivery to the laboratory to ensure accurate results.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 17, 2026. · Read our editorial policy