Understanding Your Laboratory Test: What to Expect
A stool bacteria culture test identifies harmful bacteria in your digestive tract to help diagnose infections.
{"This test detects disease-causing bacteria in your stool sample","It helps doctors diagnose bacterial gastrointestinal infections","Results guide appropriate antibiotic treatment","Sample collection is simple and non-invasive","Results typically available within 2-5 days"}
Key facts at a glance
- LOINC
- 625-4
- Short code
- STOBCX
- Synonyms
- Bacteria Stl Cult
- Category
- chemistry
- Sample
- stool
- Container
- Sterile, leak-proof, wide-mouth container with screw-cap lid; or stool culture transport swab system (e.g., Cary-Blair medium). Avoid rectal swab if possible.
- Units
- N/A
- Ref low
- 10
- Ref high
- 40
- Critical range
- — – 500 N/A
- Fasting
- false
- Population
- adult
- Sex
- all
- Age range
- ≥ 0 years
- Method
- culture
- CPT
- 87045
- SNOMED
- 40769000
- Specimen volume
- 5-10 grams of fresh stool (approximately walnut-sized) or 1-2 mL of liquid stool; rectal swab acceptable when stool specimen unavailable.
- Stability
- Unpreserved stool: process within 2 hours of collection at room temperature; refrigerated (2-8°C): process within 24 hours; in Cary-Blair transport medium: stable up to 48-72 hours at room temperature or refrigerated. Frozen specimens are unacceptable for culture.
- TAT
- 48–96 hours
- Order
- routine
This test is a laboratory analysis that measures substances in a sample of your blood, urine, or other body fluid to help your doctor evaluate how well your body is functioning.
A stool bacteria culture test, also called a stool culture or bacterial culture of stool, is a laboratory test that identifies harmful bacteria in your feces. The test works by placing a small stool sample on special growth materials (culture media) that allow bacteria to multiply. Lab technicians then examine the grown bacteria under a microscope and perform additional tests to identify exactly what type of bacteria is present.
Your doctor may order this test to help diagnose a medical condition, monitor an ongoing illness, check how well a treatment is working, or screen for possible health problems before symptoms appear.
Your doctor may order this test if you have symptoms of a bacterial gastrointestinal infection, such as diarrhea (especially if bloody), abdominal pain, cramping, nausea, vomiting, or fever. Common bacterial infections this test can detect include Salmonella, Shigella, Campylobacter, Escherichia coli O157:H7 (E. coli), and Yersinia. The test helps confirm whether your symptoms are caused by a bacterial infection and identifies the specific bacteria so the right treatment can be prescribed.
In general, you may be asked to avoid eating or drinking for a certain number of hours before your appointment, and you should tell your care team about all medicines, vitamins, and supplements you take.
Before the test, inform your doctor about any recent antibiotic use, antidiarrheal medications, or contrast dyes (like those used for CT scans or barium X-rays), as these may affect test results. You do not need to fast before providing a stool sample. It is important to collect the sample in a clean, dry, wide-mouthed container provided by your healthcare facility or laboratory. Avoid contaminating the sample with urine, toilet water, or toilet paper.
A trained health professional will collect the sample, usually by drawing a small amount of blood from a vein in your arm with a sterile needle, and the specimen is then sent to a laboratory for analysis.
Collect a small amount of stool (about 1-2 tablespoons or the size of a walnut) from a bowel movement. Ideally, collect the sample from a part of the stool that appears bloody, mucousy, or watery, as these areas are more likely to contain pathogens. Place the sample in the sterile container provided, close it tightly, and label it with your name and the date. Deliver the sample to the laboratory as soon as possible, preferably within 2 hours of collection. If you cannot deliver the sample immediately, store it in a refrigerator (not frozen) but do not keep it longer than 24 hours.
Your results are compared with standard reference ranges, and your doctor will explain whether your values fall within the normal range and what any abnormal findings may mean for your health and treatment plan.
Results are typically reported as either 'No pathogens isolated' (normal) or by naming the specific bacteria found. A positive result means a disease-causing bacterium was identified and is likely causing your symptoms. Your doctor will interpret the results in context with your symptoms, medical history, and other test results. If bacteria are found, the laboratory may also perform antibiotic susceptibility testing to determine which antibiotics will be most effective in treating the infection.
Reference range
Adult: 10-40 U/LN/A
No special dietary restrictions required. Patients should not be taking antibiotics or antidiarrheal medications, if possible, prior to specimen collection as these may decrease pathogen recovery. Specimen should be collected in the early acute phase of illness when pathogens are most likely to be present. Avoid contamination with urine, toilet water, or toilet paper.
Clinical interpretation
How abnormal results are interpreted and what conditions they suggest.
The stool bacteria culture test is primarily used to diagnose acute bacterial gastroenteritis and foodborne illnesses. It is particularly important for patients with severe, prolonged, or bloody diarrhea, as these symptoms may indicate a more serious infection requiring specific treatment. The test helps differentiate between bacterial infections (which may require antibiotics) and viral infections (which do not respond to antibiotics). Positive results also help public health authorities track and monitor outbreaks of foodborne illnesses. Additionally, the test may be used to monitor treatment effectiveness and to clear patients from isolation in hospital settings, particularly for infections like Shigella or Salmonella.
Frequently asked questions
Does a normal result mean I have no infection?
How long does it take to get results?
Do I need antibiotics if bacteria are found?
Can I collect my stool sample at home?
Are there any risks or side effects from this test?
Sources
- 1
- 2
- 3
Click any link to access the full source. PubMed Central (PMC) links provide free full-text access.
This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.
This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.
If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.
Medically reviewed by WellAlly Editorial Team Last reviewed August 17, 2026. · Read our editorial policy