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Escherichia coli (E. coli) stool culture with antimicrobial susceptibility testing (AST)

Published: August 9, 2026Updated: August 16, 2026

This test checks for the presence of *Escherichia coli* bacteria in your stool and determines how your body responds to antibiotics if the bacteria are found.

Quick summary

["Identifies harmful bacteria and guides antibiotic treatment if needed."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
13318-1
Short code
E coli EIEC Stl Cult
Synonyms
E coli EIEC Stl Cult
Category
chemistry
Sample
stool
Container
Clean container
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
organism-specific-culture
Specimen volume
5 g
Stability
Refrigerated: 24h, Frozen: 7d
TAT
4–24 hours
Order
routine

What Is This Test For?

A stool sample is examined to detect *E. coli*, a common type of bacteria found in the intestines. If present, the test also assesses whether the bacteria are resistant to certain antibiotics, helping your healthcare provider choose the most effective treatment.

Why Might You Need This Test?

Your doctor may order this test if you have symptoms like diarrhea (especially with blood or mucus), abdominal pain, fever, or if you’ve recently traveled to areas with different hygiene standards. It can also be used to confirm infections in people with recurring urinary tract infections or other health concerns linked to bacterial contamination.

What to Expect During the Test

You’ll provide a fresh stool sample (usually collected in a special container) to a lab. The sample is then grown in a controlled environment to identify *E. coli* and, if present, how it responds to antibiotics. Results typically take 2–5 days, depending on the lab’s process.

Preparation and Sample Collection

No special preparation is needed, but avoid using laxatives or enemas 24 hours before testing. Collect the sample early in the morning for best accuracy. If you’re using a collection kit, follow the instructions carefully to prevent contamination.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

Clinical Significance

Short name

E. coli stool culture

Frequently asked questions

How can this test affect my treatment?
If *E. coli* is found, your doctor will determine if it’s causing an infection (like traveler’s diarrhea) or if it’s harmless. Antibiotic resistance patterns help guide treatment—some strains may require different medications than others. Persistent symptoms after testing may prompt further evaluation.
What if my test comes back negative?
A negative result means no *E. coli* was detected in your sample. However, other bacteria or viruses could still be causing your symptoms. If you continue to experience issues, your doctor may recommend additional tests or a repeat stool sample.
Can I take antibiotics before my test?
No, it’s important to avoid antibiotics before testing unless directed by your doctor. Antibiotics can alter the bacterial balance in your stool and affect the accuracy of the results. If you’ve recently taken antibiotics, inform your healthcare provider before scheduling the test.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy