Skip to content

Fecal DNA Probe for Pathogen Detection (Multiplex Fluorescent In Situ Hybridization)

Published: August 9, 2026Updated: August 16, 2026

This test checks for genetic material from certain bacteria, viruses, or parasites in your stool sample to help identify infections.

Quick summary

["It may help diagnose gastrointestinal infections that standard stool cultures can’t detect."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
76607-1
Short code
E faecium sodA # XXX.body fld NAA+probe
Synonyms
E faecium sodA # XXX.body fld NAA+probe
Category
chemistry
Sample
serum
Container
Red-top tube (SST)
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
probe-amp-tar
Specimen volume
5 mL
Stability
Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
4–24 hours
Order
routine

Why This Test Might Be Ordered

Your doctor may recommend this test if you have symptoms like diarrhea, abdominal pain, fever, or unexplained weight loss, especially if standard stool tests (like culture) didn’t confirm an infection. It’s also used in cases where you’ve been exposed to known pathogens or if you’re at higher risk for certain infections (e.g., travel to areas with specific diseases).

How the Test Works

The test uses a special probe to detect genetic material (DNA) from specific pathogens in your stool. Unlike traditional cultures, this method can identify many types of germs simultaneously, often providing results faster. The DNA is analyzed using advanced laboratory techniques to confirm the presence of harmful microbes that might not grow well in standard culture conditions.

Sample Collection and Preparation

You’ll need to provide a fresh stool sample (collected in a sterile container) for this test. If you’re using a kit, follow the instructions carefully to ensure the sample is handled properly. Some kits may require refrigeration or immediate delivery to the lab to maintain sample integrity.

What to Expect During the Test

After your sample is collected, it’s sent to a lab where technicians prepare it for analysis. The test typically involves mixing the stool with a special solution that contains fluorescent probes. These probes bind to the DNA of specific pathogens, and the sample is then examined under a microscope or through another high-tech method to detect the presence of these genetic markers. Results are usually available within a few days.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

Clinical Significance

Short name

Fecal Pathogen DNA Probe

Frequently asked questions

How long does it take to get results from this test?
Results are usually available within 2 to 5 business days, depending on lab workload. Your doctor will contact you once the results are ready. If you have an urgent need for results, let your healthcare provider know so they can check on the progress of your test.
What does a positive result mean?
A positive result indicates the presence of genetic material from specific pathogens in your stool. This suggests you may have an infection caused by one of the targeted microbes. Your doctor will discuss the findings with you and may recommend further testing or treatment based on the specific pathogen detected. Always follow their guidance for the best course of action.
Can I eat or drink before giving this stool sample?
Yes, you can eat and drink normally before providing your stool sample. However, avoid using any laxatives or medications that could alter the stool composition, as this might affect the test results. Follow any specific instructions provided with your sample collection kit.
  1. 1
  2. 2
  3. 3

Click any link to access the full source. PubMed Central (PMC) links provide free full-text access.

This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy