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Fungal respiratory tract infection detection by nucleic acid amplification probe (lower respiratory specimen)

Published: August 9, 2026Updated: August 16, 2026

This test checks for fungal DNA in a sample from your lower respiratory tract (e.g., sputum or bronchoalveolar lavage fluid) using a specialized probe to detect fungal pathogens.

Quick summary

["Detects potential fungal infections in your lungs with high sensitivity."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
91089-3
Short code
Fungal BT2 gene Lower resp Ql NAA+probe
Synonyms
Fungal BT2 gene Lower resp Ql NAA+probe
Category
chemistry
Sample
serum
Container
Red-top tube (SST)
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
probe-amp-tar
Specimen volume
5 mL
Stability
Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
4–24 hours
Order
routine

What This Test Measures

The test uses a genetic probe to identify specific fungal DNA sequences present in your lower respiratory tract. This is done through a nucleic acid amplification process, which amplifies and detects fungal genetic material that may indicate an infection caused by fungi such as *Candida* or *Aspergillus*. The probe is designed to target regions unique to fungal organisms, helping differentiate fungal infections from other causes of respiratory symptoms.

How the Test Works

The test involves collecting a sample from your lower respiratory tract (e.g., sputum or fluid obtained via bronchoscopy). The sample is then processed to extract genetic material. A specialized probe binds to fungal DNA sequences, and the test detects and quantifies these sequences using amplification techniques. This process is highly sensitive and specific for fungal pathogens.

Why It Might Be Ordered

Your healthcare provider may order this test if you have symptoms suggestive of a fungal lung infection, such as persistent cough, chest pain, fever, or difficulty breathing, especially if you have a weakened immune system, recent lung procedures, or risk factors like diabetes or HIV. It is particularly useful in diagnosing infections that may not respond to standard antibiotics.

When Results May Be Abnormal

Abnormal results typically indicate the presence of fungal DNA in your respiratory tract, suggesting a fungal infection. However, false positives can occur if the sample contains non-infectious fungal material or if contamination is present. False negatives may happen if the fungal load is too low to detect or if the sample was not collected properly.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

This test plays a critical role in confirming fungal infections in the lungs, which can be challenging to diagnose with traditional methods. Early and accurate detection is essential for guiding appropriate antifungal treatment and improving patient outcomes, particularly in immunocompromised individuals or those with advanced lung disease.

Frequently asked questions

What does a positive result mean?
A positive result means that fungal DNA was detected in your sample, suggesting the presence of a fungal infection in your lower respiratory tract. This finding should be followed up with further medical evaluation, including antifungal treatment tailored to the identified pathogen.
What if my test results are negative?
A negative result means that fungal DNA was not detected in your sample. However, this does not definitively rule out a fungal infection. If you continue to have symptoms, your healthcare provider may recommend additional testing or further evaluation to explore other causes of your symptoms.
How long does it take to get results?
Results are typically available within 24 to 48 hours, depending on the laboratory’s processing schedule and the complexity of the test. Your healthcare provider will contact you with the results once they are ready.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy