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Viral RNA Detection in Nasopharyngeal Aspirate by Nucleic Acid Amplification Test (NAAT)

Published: August 9, 2026Updated: August 16, 2026

This test checks for the presence of viruses in your nasal or throat secretions using a simple swab. It helps diagnose infections like colds, flu, or other respiratory illnesses.

Quick summary

["Quick viral infection diagnosis with a simple nasal swab test."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
85581-7
Short code
M avium+M intracel DNA Spt/Bro NAA+probe
Synonyms
M avium+M intracel DNA Spt/Bro NAA+probe
Category
chemistry
Sample
sputum
Container
Sterile sputum container
Units
N/A
Ref low
0.8
Ref high
1.2
Critical range
— – 5 N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
probe-amp-tar
CPT
85610
SNOMED
396252006
Specimen volume
3-5 mL
Stability
Room temperature: 2h, Refrigerated: 24h
TAT
4–24 hours
Order
routine

How the Test Works

A healthcare provider collects a sample from your nose or throat using a soft swab. The swab is then sent to a lab where viral genetic material is extracted and analyzed using a highly sensitive test called nucleic acid amplification. This process detects even small amounts of virus if present.

What to Expect Before the Test

You may experience mild discomfort or a slight tickle when the swab is inserted, but it usually doesn’t cause pain. You can eat, drink, or take medications normally before the test. Avoid heavy sedation or anesthesia if possible, as it may affect sample quality.

What to Expect During the Test

The test takes about 5–15 minutes. You’ll sit comfortably while the provider gently inserts the swab into your nasal passage or throat. The swab is rotated briefly to collect a sample before being removed.

What to Expect After the Test

You may have mild discomfort or a slight sore throat for a few hours. Avoid blowing your nose vigorously or using nasal sprays for 1–2 hours afterward to prevent sample contamination. Most people can return to normal activities immediately.

Reference range

INR: 0.8-1.2 (warfarin: 2.0-3.0)N/A

Specimen: sputum

Inform your healthcare provider if you are taking blood thinners. No special preparation required.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

This test is crucial for diagnosing viral respiratory infections early, guiding treatment decisions, and preventing the spread of contagious illnesses. It helps doctors differentiate between viral and bacterial infections, ensuring appropriate care. Results can also inform public health measures, such as isolation recommendations or vaccination strategies.

Short name

NAAT for Respiratory Viruses

Frequently asked questions

Why was I asked to take this test?
Your doctor may recommend this test if you have symptoms like cough, fever, sore throat, or shortness of breath, especially if you’ve been exposed to someone with a contagious respiratory illness. It may also be used during outbreaks, before surgeries, or for routine screening in certain settings.
How long will I need to wait for results?
Results are typically available within 24–72 hours, depending on lab processing times. Some labs offer same-day results for urgent cases. Your doctor will contact you with the outcome as soon as it’s available.
Can I eat or drink before the test?
Yes, you can eat, drink, or take medications normally before the test. Avoid heavy sedation or anesthesia, as it may interfere with sample quality.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy