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Pneumococcal Nucleic Acid Detection (Lower Respiratory Tract Sample) via Probe-Based Assay

Published: August 9, 2026Updated: August 16, 2026

This test checks for the genetic material of *Streptococcus pneumoniae* (pneumococcus) in a sample from your lower respiratory tract, such as sputum or induced sputum, using a molecular probe method.

Quick summary

["Helps diagnose pneumonia or other lung infections caused by pneumococcus."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
88579-8
Short code
M pneumo DNA Lower resp Ql NAA+probe
Synonyms
M pneumo DNA Lower resp Ql NAA+probe
Category
chemistry
Sample
serum
Container
Red-top tube (SST)
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
probe-amp-tar
Specimen volume
5 mL
Stability
Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
4–24 hours
Order
routine

What This Test Measures

The test detects the presence of *Streptococcus pneumoniae* DNA in your respiratory secretions. This is done using a specialized probe that binds to unique genetic sequences found only in pneumococcal bacteria. If the probe binds to these sequences, it confirms the presence of the organism.

Why It’s Ordered

Your healthcare provider may recommend this test if you have symptoms like cough, fever, or difficulty breathing that suggest pneumonia or another lung infection. It’s particularly useful for identifying pneumococcal infections in people who may not yet show classic signs of illness or in cases where other tests are inconclusive.

Sample Collection and Preparation

A sample of your lower respiratory secretions (e.g., sputum or induced sputum) is collected. This may involve coughing into a container or using a device to induce deeper coughing. The sample is then processed in the lab for testing.

How the Test Works

The test uses polymerase chain reaction (PCR) technology with a probe to amplify and detect specific genetic fragments of *Streptococcus pneumoniae*. This method is highly sensitive and can identify the bacteria even in small amounts.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

◆Associated findings1

Short name

Pneumococcal NAAT (Lower Resp)

Frequently asked questions

How long does it take to get results?
Results are typically available within 24 to 48 hours, depending on lab processing times.
What does a positive result mean?
A positive result means the test detected genetic material from *Streptococcus pneumoniae* in your sample, strongly suggesting a pneumococcal infection. This may require further medical evaluation or treatment with antibiotics targeting pneumococcus.
Can I take antibiotics before the test?
Yes, you may have already started antibiotics, but if you haven’t, avoid them for at least 48 hours before the test to ensure accurate results. Always follow your healthcare provider’s instructions.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy