: Mycobacterium species Identification by Sequencing
: This test uses molecular sequencing to identify which species of Mycobacterium is present in a sample. It helps distinguish tuberculosis-causing organisms from other, often less harmful, mycobacteria.
[": Sequencing provides a precise species-level identification of Mycobacterium that guides treatment decisions."]
Key facts at a glance
- LOINC
- 9825-1
- Short code
- Mycobacterium Islt
- Synonyms
- Mycobacterium Islt
- Category
- chemistry
- Sample
- serum
- Container
- Red-top tube (SST)
- Units
- N/A
- Fasting
- false
- Population
- adult
- Sex
- all
- Age range
- 18–65 years
- Specimen volume
- 5 mL
- Stability
- Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
- Hemolysis max
- 500
- Lipemia max
- 1000
- Icterus max
- 500
- TAT
- 4–24 hours
- Order
- routine
: What This Test Does
: The test reads genetic material (DNA) from a mycobacterium in your sample and compares it to known reference sequences. This allows the laboratory to name the exact species rather than just confirming that some mycobacterium is present.
: Why Species Identification Matters
: Different mycobacteria require very different treatments. Members of the Mycobacterium tuberculosis complex need specific antibiotic regimens, while many non-tuberculous mycobacteria are handled differently or may not need treatment at all. Knowing the species helps your care team choose the right approach.
: How the Sample Is Collected
: The sample depends on where the infection is suspected and may include sputum, other respiratory specimens, tissue, or fluid. Your provider will explain how your particular sample will be collected. Molecular testing is often run on a specimen that has already shown mycobacteria by another method.
: What Results Mean
: A result names the species or group detected, which your provider interprets alongside your symptoms, imaging, and other tests. A result that does not identify a species, or that is negative, does not by itself rule infection in or out and is interpreted in context.
Clinical interpretation
How abnormal results are interpreted and what conditions they suggest.
: Species-level identification of mycobacteria is clinically important because it separates tuberculosis from non-tuberculous mycobacterial disease, informs whether treatment is needed, and guides selection of an appropriate antimicrobial regimen. Sequencing is especially useful when conventional testing cannot clearly distinguish closely related species.
Short name
: NONE
Frequently asked questions
: Is this the same as a tuberculosis test?
: Does a result mean I definitely have an infection?
: Will I get a numeric reference range with this result?
Sources
- 1
- 2Lab Tests OnlineSource
- 3
Click any link to access the full source. PubMed Central (PMC) links provide free full-text access.
This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.
This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.
If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.
Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy