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Chlamydia trachomatis (NG) nucleic acid test by quantitative PCR (urine specimen)

Published: August 9, 2026Updated: August 16, 2026

This test detects genetic material from *Chlamydia trachomatis*, a common bacterial infection that can affect the reproductive system, causing pain, discharge, or complications like infertility if untreated. It’s often used as part of a screening or diagnostic workup for sexually transmitted infections (STIs).

Quick summary

["A urine PCR test helps quickly identify *Chlamydia* infection without waiting for culture results."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
698-1
Short code
N gonorrhoea Spec Ql Cult
Synonyms
N gonorrhoea Spec Ql Cult
Category
chemistry
Sample
serum
Container
Red-top tube (SST)
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
organism-specific-culture
Specimen volume
5 mL
Stability
Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
4–24 hours
Order
routine

Why This Test Is Used

Doctors may order this test if you have symptoms like unusual discharge, pain during urination, or lower abdominal pain, especially if you’re sexually active. It’s also used as a screening test for STIs in certain high-risk groups, such as people with multiple sexual partners or those with other STIs. Some healthcare providers recommend routine testing for sexually active individuals under 25 or those with a history of STIs.

How the Test Works

The test analyzes urine samples for genetic material (DNA) from *Chlamydia trachomatis* using a highly sensitive PCR (polymerase chain reaction) method. PCR amplifies tiny amounts of DNA to detect the presence of the infection, even if symptoms aren’t yet obvious.

Sample Collection

You’ll collect a mid-stream urine sample in a sterile container provided by your healthcare provider. The sample is then sent to a lab for testing. No special preparation is needed, but avoid urinating right before the test if possible.

Test Results Interpretation

Results are typically available within 1–3 business days. A positive result means the test detected *Chlamydia* DNA, indicating an active infection that requires treatment. A negative result means the infection was not detected in this sample, but reinfection can happen, so follow-up testing may be recommended.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

Untreated *Chlamydia* can lead to serious complications, including pelvic inflammatory disease (PID) in women, which may cause infertility or chronic pelvic pain. In men, it can cause epididymitis or urethritis. Early detection and treatment with antibiotics can prevent these complications and reduce transmission to sexual partners.

Short name

Urine Chlamydia PCR

Frequently asked questions

How long does it take to get results?
Results are usually ready within 1–3 business days, depending on lab processing times. Your healthcare provider will contact you directly with the results.
What does a positive result mean?
A positive result means the test detected genetic material from *Chlamydia trachomatis*, confirming an active infection. This requires medical treatment with prescribed antibiotics to clear the infection and prevent complications.
Can I still have sex while waiting for results?
Yes, but use barrier methods (like condoms) to prevent spreading the infection to sexual partners. Avoid sex until both you and your partner have completed treatment, as untreated *Chlamydia* can be passed on.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy