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Gastric Microbial Community Profile (16S rRNA Gene Sequencing)

Published: August 9, 2026Updated: August 17, 2026

This test examines the types and amounts of bacteria naturally present in your stomach, helping assess gut health and potential microbial imbalances.

Quick summary

["Understanding your stomach’s bacterial environment can support digestive health and inform treatment for infections or imbalances."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 17, 2026Editorial policy

Key facts at a glance

LOINC
10855-5
Short code
O+P Duod or Gastric fl Micro
Synonyms
O+P Duod or Gastric fl Micro
Category
chemistry
Sample
serum
Container
Red-top tube (SST)
Units
N/A
Ref low
10
Ref high
40
Critical range
— – 500 N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
microscopy-light
CPT
84484
SNOMED
302774002
Specimen volume
5 mL
Stability
Room temperature: 4h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
500
Lipemia max
1000
Icterus max
500
TAT
4–24 hours
Order
routine

Why It’s Done

Your healthcare provider may recommend this test if you have symptoms like persistent stomach discomfort, unexplained weight changes, or conditions linked to altered gut microbiota, such as gastroparesis or certain digestive disorders. It can also be part of research or monitoring for conditions like inflammatory bowel disease or food intolerances.

What to Expect Before the Test

No special preparation is typically needed, but you may be asked to fast for a few hours before the procedure. Your sample will be collected via a simple swab of your stomach lining, often done during an endoscopy or with an oral rinse. Avoid eating or drinking for a specified period beforehand to ensure accurate results.

What the Results Mean

Results show the relative abundance of different bacterial species in your stomach. A healthy microbiome usually contains a diverse mix of bacteria, while imbalances (dysbiosis) may indicate infections, inflammation, or other underlying issues. Your provider will interpret these findings in the context of your symptoms and medical history.

Common Conditions Monitored

This test helps diagnose or monitor conditions such as Helicobacter pylori infection (a common stomach bacteria linked to ulcers or gastritis), chronic gastritis, or other gastrointestinal disorders. It may also be used in research settings to study gut health or evaluate the effects of treatments like antibiotics or probiotics.

Reference range

Adult: 10-40 U/LN/A

Specimen: serum

No special preparation required. Avoid fatty meals before the test if possible.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

Clinical Significance

Short name

Gut Bacteria Analysis

Frequently asked questions

What does this test measure?
This test measures the diversity and composition of bacterial species present in your stomach using genetic sequencing of the 16S rRNA gene. It identifies which bacteria are present and their relative proportions, helping to assess gut health and detect potential infections or imbalances.
How might my results affect my treatment?
If your results show an imbalance or infection (e.g., Helicobacter pylori), your provider may recommend targeted treatments such as antibiotics, acid-reducing medications, or other therapies to restore balance. Follow-up tests may be needed to monitor progress.
Can I prepare differently if I have a known stomach condition?
Yes, if you have a known condition like gastroparesis or a history of severe stomach issues, your provider may give specific instructions. For example, they might recommend avoiding certain foods or medications that could interfere with the test results. Always follow their guidance to ensure accurate outcomes.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 17, 2026. · Read our editorial policy