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Uropathogenic *Escherichia coli* (UPEC) DNA by Nucleic Acid Amplification Probe

Published: August 9, 2026Updated: August 16, 2026

This test detects genetic material from *E. coli* bacteria that may cause urinary tract infections (UTIs). It helps confirm if the infection is caused by a specific strain linked to recurrent or complicated UTIs.

Quick summary

["This test can help identify the cause of a UTI if other tests are inconclusive or if you have symptoms of infection despite antibiotics."]

Medically reviewed by WellAlly Editorial TeamLast reviewed August 16, 2026Editorial policy

Key facts at a glance

LOINC
99031-7
Short code
S. saprophyticus DNA Ur Ql NAA+probe
Synonyms
S. saprophyticus DNA Ur Ql NAA+probe
Category
chemistry
Sample
urine
Container
Sterile urine container
Units
N/A
Fasting
false
Population
adult
Sex
all
Age range
18–65 years
Method
probe-amp-tar
Specimen volume
10 mL
Stability
Room temperature: 2h, Refrigerated: 24h, Frozen: 7d
Hemolysis max
0
Lipemia max
0
Icterus max
0
TAT
4–24 hours
Order
routine

Why This Test Is Used

Doctors may order this test if you have symptoms of a urinary tract infection (e.g., frequent urination, pain, or cloudy urine) and other tests (like a urine culture) are either negative or do not show the typical bacteria causing UTIs. It can also be used in cases of recurrent UTIs or infections that do not respond to standard antibiotics. This helps determine if the infection is caused by a strain resistant to common treatments or if other factors are involved.

How the Test Works

This test uses a special probe to detect genetic material (DNA) from *E. coli* bacteria in your urine. Unlike a traditional urine culture, which grows bacteria to identify them, this test directly measures the presence of specific genetic sequences linked to certain strains of *E. coli* that commonly cause UTIs. This can provide results more quickly.

What to Expect Before the Test

No special preparation is needed for this test. You will provide a urine sample, similar to a routine urine test. If you are taking antibiotics, let your healthcare provider know, as this may affect the results.

What the Results Mean

A positive result means the test detected genetic material from *E. coli* bacteria, suggesting that this strain may be causing your UTI. A negative result means no detectable genetic material was found, though other bacteria or causes of UTIs could still be present. Results should be interpreted by your healthcare provider in the context of your symptoms and medical history.

Clinical interpretation

How abnormal results are interpreted and what conditions they suggest.

This test is particularly useful for identifying specific strains of *E. coli* that may be resistant to common antibiotics, such as fluoroquinolones. It can help guide treatment decisions, especially in cases of recurrent UTIs or infections that do not resolve with standard antibiotics. It may also be used in research or specialized clinical settings to study antibiotic resistance patterns or infection dynamics.

Short name

UPEC DNA Test

Frequently asked questions

Will this test show if I have a UTI?
This test detects genetic material from *E. coli* bacteria but does not directly measure the presence of infection. It can help identify if the infection is caused by a specific strain of *E. coli*, which may influence treatment choices. However, symptoms alone or other tests (like a urine culture) are still needed to confirm a UTI.
Can I take antibiotics before this test?
Yes, you can take antibiotics before the test, but it may affect the results. If you are unsure, discuss it with your healthcare provider. They may recommend waiting or adjusting your treatment plan based on the test outcome.
How long will it take to get results?
Results from this test are typically available within a few hours to a couple of days, depending on the laboratory. This is faster than a traditional urine culture, which can take several days to weeks.
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This information is for educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment.

Medical Disclaimer

This content is for general informational and educational purposes only and is not a substitute for professional medical advice, diagnosis, or treatment. Always seek the guidance of a qualified healthcare provider with any questions you have about a medical condition, and never disregard professional medical advice or delay seeking it because of something you read here.

If you think you may have a medical emergency, call your local emergency number or go to the nearest emergency department immediately.

Medically reviewed by WellAlly Editorial Team Last reviewed August 16, 2026. · Read our editorial policy