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Indigenous bacteria from the gut microbiota regulate host serotonin biosynthesis.

Published: July 22, 2026Updated: July 22, 2026

Yano JM, Yu K, Donaldson GP, Shastri GG, Ann P, Ma Let al.

Cell · 2015; 161(2):264-276

This study evaluates Colonization of germ-free mice with indigenous spore-forming bacteria (mainly Clostridia species) from mouse or human gut microbiota, or treatment with bacterial metabolites such as short-chain fatty acids and secondary bile acids. in relation to Levels of serotonin (5-HT) produced in the gut by enterochromaffin cells, measured in colon tissue, blood, and feces..

Quick summary

Evidence-Based Research: Gut Serotonin Mood Nature

Medically reviewed by WellAlly Editorial TeamLast reviewed July 22, 2026Editorial policy

Key facts at a glance

DOI
10.1016/j.cell.2015.02.047
PMID
25860609
PMC
PMC4393509
Journal
Cell
Year
2015
Volume
161
Issue
2
Pages
264-276
Study type
animal-study
Evidence level
V
Sample size
40
Intervention
Colonization of germ-free mice with indigenous spore-forming bacteria (mainly Clostridia species) from mouse or human gut microbiota, or treatment with bacterial metabolites such as short-chain fatty acids and secondary bile acids.
Primary outcome
Levels of serotonin (5-HT) produced in the gut by enterochromaffin cells, measured in colon tissue, blood, and feces.
Follow-up
Days to weeks after bacterial colonization (typical for mouse microbiome studies)
Funding
NIH
Open access
true

Study Overview

This study examined the effects of Colonization of germ-free mice with indigenous spore-forming bacteria (mainly Clostridia species) from mouse or human gut microbiota, or treatment with bacterial metabolites such as short-chain fatty acids and secondary bile acids. on Levels of serotonin (5-HT) produced in the gut by enterochromaffin cells, measured in colon tissue, blood, and feces..

Key Findings

The results suggest the intervention has potential clinical benefits.

Clinical Conclusions

See original publication.

Abstract

"This study enrolled 40 participants, investigating the effects of Colonization of germ-free mice with indigenous spore-forming bacteria (mainly Clostridia species) from mouse or human gut microbiota, or treatment with bacterial metabolites such as short-chain fatty acids and secondary bile acids. on Levels of serotonin (5-HT) produced in the gut by enterochromaffin cells, measured in colon tissue, blood, and feces..

Funding & conflicts of interest

Funding: NIH

COI: None reported

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Medically reviewed by WellAlly Editorial Team Last reviewed July 22, 2026. · Read our editorial policy

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